CDS

Accession Number TCMCG007C46350
gbkey CDS
Protein Id XP_009106560.1
Location complement(join(28060536..28061084,28061153..28061280,28061802..28061905,28061984..28062111,28062192..28062322,28062480..28062699))
Gene LOC103832329
GeneID 103832329
Organism Brassica rapa

Protein

Length 419aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009108312.3
Definition solanesyl diphosphate synthase 1, chloroplastic [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category H
Description Belongs to the FPP GGPP synthase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R07267        [VIEW IN KEGG]
R09250        [VIEW IN KEGG]
R09251        [VIEW IN KEGG]
KEGG_rclass RC00279        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K05356        [VIEW IN KEGG]
EC 2.5.1.84        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.85        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006732        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009108        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010236        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0042180        [VIEW IN EMBL-EBI]
GO:0042181        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050347        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901661        [VIEW IN EMBL-EBI]
GO:1901663        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGATGACATCTTGTCGGAATATTGACTTGGGTACTAGTGTTCTTGATCTGATCTCGTGTGGCTGTGGTCGTCGTCAGTTTCTATTAGGCAACTTTCCCAAGGCTGTTTGTACGGCGAGAAGCTACGGCGGTCGGAATCTGGTGTTTCTCCGGCGTGACGTGGGGAGGAGCTGCAAAGCTGTTCCGACAAAACCCAAAGAGATCTCTTTGGTCAACGGAATAGGTGAAGCCAAAACGGTGAGTTTTGATTTGAGGCAAGAGACCTCCTCAAAGCAGCCCATTTCGTTGGCGAATCTGTTTGAGGTTGTAGCTGATGATCTTCAGACGTTGAATGATAATCTTTTATCGATTGTTGGTGCAGAGAATCCGGTTTTGATATCTGCAGCTGAGCAAATCTTCGGAGCTGGTGGTAAAAGGATGAGACCCGGTTTAGTGTTCCTTGTTTCACGAGCCACTGCAGAGCTAGCTGGCCTAAAGGAACTTACAACGGAACATAGGCGTTTAGGTGAGATCATTGAGATGATTCACACTGCAAGCTTGATACATGATGATGTGTTAGATGAGAGTGATATGCGCAGAGGTAAGGAAACAGTTCACGAGCTTTTTGGCACGAGAGTAGCTGTACTAGCTGGTGATTTCATGTTTGCTCAAGCATCATGGTACTTAGCCAACCTCGAGAACCTGGAAGTTATCAAGCTCATAAGTCAGGTGATCAAAGACTTTGCGAGCGGAGAGATAAAGCAAGCCTCGAGTCTGTTCGACTGTGACGTTACTCTAGAAGACTACTTGCTCAAGAGTTACTACAAGACAGCCTCGCTGGTGGCCGCAAGCACCAAAGGAGCTGCTATCTTCAGCAGAGTCGATACCGATGTGACAGAGCAGATGTACGAGTTCGGGAAGAATCTCGGCCTCTCTTTCCAAGTGGTCGACGACATTTTGGACTTCACTCAGTCGTCAGAGCAGCTAGGGAAGCCAGCAGGGAGTGATCTGGCTAAAGGTAACTTAACCGCGCCTGTGATTTTCGCGCTGGAGAAGGAGCCGAGGCTGAGAGAGATCATAGAGTCTGAGTTCTGCGAGGAGGGTTCTCTGGAAGAAGGGATTGAGTTGGTGAGAGAAGGCGGTGGAATCAGAAGAGCGCAAGAGTTGGCTAGGGAGAAAGCTGATGAAGCTTTGAAGAATCTGCAGTGTTTGCCTCAGAGTGGCTTCAGGTCGGCTCTAGAAGAAATGGTGATGTTTAATCTTGAAAGAATCGATTAG
Protein:  
MMMTSCRNIDLGTSVLDLISCGCGRRQFLLGNFPKAVCTARSYGGRNLVFLRRDVGRSCKAVPTKPKEISLVNGIGEAKTVSFDLRQETSSKQPISLANLFEVVADDLQTLNDNLLSIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSRATAELAGLKELTTEHRRLGEIIEMIHTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDVTLEDYLLKSYYKTASLVAASTKGAAIFSRVDTDVTEQMYEFGKNLGLSFQVVDDILDFTQSSEQLGKPAGSDLAKGNLTAPVIFALEKEPRLREIIESEFCEEGSLEEGIELVREGGGIRRAQELAREKADEALKNLQCLPQSGFRSALEEMVMFNLERID